| MirGeneDB ID | Ofu-Novel-4 |
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| Family name |
OFU-NOVEL-4 (all species) |
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| Seed |
CUUCAGU |
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| Species |
Tubeworm (Owenia fusiformis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. fusiformis
|
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| Node of Origin (family) |
O. fusiformis
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000009.1: 37179703-37179762 [+]
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Precursor
(pre-Mir +30nt flank) |
AACUCUAUGACUAUUACUCUCCGUGUUUGUUGCCCUUCCUUUCCUUGAAGACAUUAUAGAUAACUUGUCUUCAGUAAAGUGAGGUGCUGCCAAACACAGACCAUAUCACCAAUAUUAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACUCUAUGACUAUUACUC- C UU- -| UC C U UUAUA
UC GUGUUUG GC CCU CUUU CU GAAGACA G
AG CACAAAC CG GGA GAAA GA CUUCUGU A
CUAAUUAUAACCACUAUACC A CGU U^ GU U - UCAAU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Ofu-Novel-4_5p* |
| mirBase accession | None |
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| Sequence |
0- UGCCCUUCCUUUCCUUGAAGACA -23
Get sequence
|
|---|
| Mature sequence |
Ofu-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UCUUCAGUAAAGUGAGGUGCUGC -60
Get sequence
|
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