| MirGeneDB ID | Ofu-Novel-4 |
|---|
| Family name |
OFU-NOVEL-4 (all species) |
|---|
| Seed |
CUUCAGU |
|---|
| Species |
Tubeworm (Owenia fusiformis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. fusiformis
|
|---|
| Node of Origin (family) |
O. fusiformis
|
|---|
Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000009.1: 37179703-37179762 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
AACUCUAUGACUAUUACUCUCCGUGUUUGUUGCCCUUCCUUUCCUUGAAGACAUUAUAGAUAACUUGUCUUCAGUAAAGUGAGGUGCUGCCAAACACAGACCAUAUCACCAAUAUUAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACUCUAUGACUAUUACUC- C UU- -| UC C U UUAUA
UC GUGUUUG GC CCU CUUU CU GAAGACA G
AG CACAAAC CG GGA GAAA GA CUUCUGU A
CUAAUUAUAACCACUAUACC A CGU U^ GU U - UCAAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ofu-Novel-4_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGCCCUUCCUUUCCUUGAAGACA -23
Get sequence
|
|---|
| Mature sequence |
Ofu-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UCUUCAGUAAAGUGAGGUGCUGC -60
Get sequence
|
|---|
