| MirGeneDB ID | Ofu-Novel-6 |
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| Family name |
OFU-NOVEL-6 (all species) |
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| Seed |
GAGGGGC |
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| Species |
Tubeworm (Owenia fusiformis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. fusiformis
|
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| Node of Origin (family) |
O. fusiformis
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000011.1: 22363723-22363778 [-]
|
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Precursor
(pre-Mir +30nt flank) |
AUUAUAAUUUUGGAGAAACUUAGAAGAACGGACACAAGUUGACACCUCCUGCUUGUAGAAUAUGCAGAGGGGCCAAUUUCUGUCUGCGACAUCUUAUAAUUCAACUUUAUUUGCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUAUAAUUUUGGAGAAACUUAG A----| C ACA - UUGUA
AAGA CGGACA AAGUUG CCUC CUGC \
UUCU GUCUGU UUUAAC GGGG GACG G
UUCGUUUAUUUCAACUUAAUA-- ACAGC^ C C-- A UAUAA
110 100 90 80 70 60 |
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| Deep sequencing |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Ofu-Novel-6_5p* |
| mirBase accession | None |
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| Sequence |
0- GACACAAGUUGACACCUCCUGC -22
Get sequence
|
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| Mature sequence |
Ofu-Novel-6_3p |
| mirBase accession | None |
|---|
| Sequence |
35- AGAGGGGCCAAUUUCUGUCUG -56
Get sequence
|
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