| MirGeneDB ID | Ofu-Novel-8 |
|---|
| Family name |
OFU-NOVEL-8 (all species) |
|---|
| Seed |
GUCCUAG |
|---|
| Species |
Tubeworm (Owenia fusiformis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. fusiformis
|
|---|
| Node of Origin (family) |
O. fusiformis
|
|---|
Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000058.1: 48082-48148 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAGCCUAGUGAUAAUCUAUACAUUUGUAUUCCCUUUGACUUACUAUGGACAGUCAGCUUGCAAGAGGUCUCAGACUGUCCUAGUGGGUUGAAGGCUUCACAGGUGUACUUGCCAGCAUCACUAGGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAGCCUAGUGAUAAUCUA--| AUUC UG U CAGCUUGCA
UACAUUUGU CCUU ACUUACUA GGACAGU A
AUGUGGACA GGAA UGGGUGAU CCUGUCA G
AGGGAUCACUACGACCGUUC^ CUUC GU - GACUCUGGA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ofu-Novel-8_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCCUUUGACUUACUAUGGACAGU -23
Get sequence
|
|---|
| Mature sequence |
Ofu-Novel-8_3p |
| mirBase accession | None |
|---|
| Sequence |
45- UGUCCUAGUGGGUUGAAGGCUU -67
Get sequence
|
|---|
