| MirGeneDB ID | Ofu-Novel-9 |
|---|
| Family name |
OFU-NOVEL-9 (all species) |
|---|
| Seed |
CGAUUCU |
|---|
| Species |
Tubeworm (Owenia fusiformis) |
|---|
| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
O. fusiformis
|
|---|
| Node of Origin (family) |
O. fusiformis
|
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000001.1: 27118641-27118697 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAGGCCACCAAGCAUAUAUUGUCUCUAAAGGUGCAUGUAUUUGAAUCGCUUUUCGACUUUUAAUAAACGAUUCUUUUGCAUGUCCCUUGUUGGGCAGUUGUACUUCGAUGUCAAAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAGGCCACCAAGCAUAU--| CUA UG UUU CUUUUCGAC
AUUGUCU AAGG CAUGUA GAAUCG \
UGACGGG UUCC GUACGU CUUAGC U
GUAAACUGUAGCUUCAUGU^ UUG CU UUU AAAUAAUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Ofu-Novel-9_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GUGCAUGUAUUUGAAUCGCUU -21
Get sequence
|
|---|
| Mature sequence |
Ofu-Novel-9_3p |
| mirBase accession | None |
|---|
| Sequence |
36- ACGAUUCUUUUGCAUGUCCCU -57
Get sequence
|
|---|
