MirGeneDB ID | Ovu-Novel-58 |
Family name |
OCT-NOVEL-58 (all species) |
Seed |
AUUUAAG |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Obi-Novel-58
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Node of Origin (locus) |
Octopus
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Node of Origin (family) |
Octopus
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01038076.1: 54500-54557 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CACUCACAGCUGAGUGUUCCUUCCAGUACUAAUUUAAGGUAUCUGUUUCUGUUUUUGUGGUAAAAUGGAAUCGGUUAACUUAGAGUAGUAACGGAGGAAAAUCUUGGAUUUUUAAUAA
Get precursor sequence
|
Structure | 10 20 30 40 50
CACUCACAGCUGAGUGU---| CAG A GUAU U UUUG
UCCUUC UACUA UUUAAG CUG UUCUGUU U
AGGAGG AUGAU AGAUUC GGC AAGGUAA G
AAUAAUUUUUAGGUUCUAAA^ CA- G AAUU U AAUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
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Mature sequence |
Ovu-Novel-58_5p |
mirBase accession | None |
Sequence |
0- AAUUUAAGGUAUCUGUUUCUGUU -23
Get sequence
|
Star sequence |
Ovu-Novel-58_3p* |
mirBase accession | None |
Sequence |
35- UGGAAUCGGUUAACUUAGAGUAG -58
Get sequence
|