MirGeneDB ID | Ovu-Novel-88 |
Family name |
OCT-NOVEL-88 (all species) |
Seed |
CUGCUGA |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Obi-Novel-88
|
Node of Origin (locus) |
Octopus
|
Node of Origin (family) |
Octopus
|
Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01002497.1: 161946-162007 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCGUUUAAGUUGUAUUCCUGGUAAAUAAACUCUGCUGAUUCCUUACGAAGCCUCCAUAGUUCCAGUUGGGGCUCGUGGGUUAACAACAGAGUUUUUUUCUGCCAGAAUAUGAAGACAACUUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UCGUUUAAGUUGUAUUCC AAU--| C AUUC A CCAUAGU
UGGUA AAACUCUG UG CUUACGA GCCU \
ACCGU UUUGAGAC AC GGGUGCU CGGG U
UUUCAACAGAAGUAUAAG CUUUU^ A AAUU - GUUGACC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Ovu-Novel-88_5p |
mirBase accession | None |
Sequence |
0- UCUGCUGAUUCCUUACGAAGCCU -23
Get sequence
|
Star sequence |
Ovu-Novel-88_3p* |
mirBase accession | None |
Sequence |
40- GCUCGUGGGUUAACAACAGAGU -62
Get sequence
|