| MirGeneDB ID | Pab-Mir-12462 |
|---|
| Family name |
MIR-12462 (all species) |
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| Seed |
UAGAUGA |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-12462-v1
Hsa-Mir-12462-v2
Mml-Mir-12462
|
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 94489897-94489955 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CACAGCAGCUGCAGGGCCCAAGUCCCCAGCUCAGCUGCAGCCCCCAUGGGUCCACCUUGAGGCAAGGAUAGAUGAGGGCUUGGCUGUGAAAUGAAACCAGGGGGGAGACGGAAGCUGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CACAGCAGCUGCAGGGC- AA CCC GCU--| C C GG ACCUU
CC GU CA CAGCUG AGCCC CAU GUCC G
GG CA GU GUCGGU UCGGG GUA UAGG A
ACGUCGAAGGCAGAGGGG AC AA- AAAGU^ - A GA AACGG
110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-12462_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- UCAGCUGCAGCCCCCAUGGGUCC -23
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-12462_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- AUAGAUGAGGGCUUGGCUGUGA -59
Get sequence
|
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