| MirGeneDB ID | Pab-Mir-12462 |
|---|---|
| Family name | MIR-12462 (all species) |
| Seed | UAGAUGA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-12462-v1 Hsa-Mir-12462-v2 Mml-Mir-12462 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 94489897-94489955 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CACAGCAGCUGCAGGGCCCAAGUCCCCAGCUCAGCUGCAGCCCCCAUGGGUCCACCUUGAGGCAAGGAUAGAUGAGGGCUUGGCUGUGAAAUGAAACCAGGGGGGAGACGGAAGCUGCAGet precursor sequence |
| Structure | 10 20 30 40 50 CACAGCAGCUGCAGGGC- AA CCC GCU--| C C GG ACCUU CC GU CA CAGCUG AGCCC CAU GUCC G GG CA GU GUCGGU UCGGG GUA UAGG A ACGUCGAAGGCAGAGGGG AC AA- AAAGU^ - A GA AACGG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-12462_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAGCUGCAGCCCCCAUGGGUCC -23
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|
| Mature sequence | Pab-Mir-12462_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AUAGAUGAGGGCUUGGCUGUGA -59
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|
