| MirGeneDB ID | Pab-Mir-1914 |
|---|---|
| Family name | MIR-1914 (all species) |
| Seed | CCUGUGC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-1914 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054700.2: 68408966-68409023 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GUAUGAGACCUAUCAGCACGUGUGAGCCCGCCCUGUGCCCGUCCCACUUCUGCUGCUGCUUAGCUCAGGAGGGGUCCCGCACUGGGAGGGGCCCUCACACCCUACCCCCCCUAGCUUUGet precursor sequence |
| Structure | 10 20 30 40 50 GUAUGAGACCUAUCAGCAC -- G-| U CCGU A CUGCUG GUGUGA GCCC CCC GUGC CCC CUUCUG \ CACACU CGGG GGG CACG GGG GAGGAC C UUUCGAUCCCCCCCAUCC- CC GA^ U CCCU - UCGAUU 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | Although absent in M. mulatta this locus is present in other old world monkeys. |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-1914_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CCCUGUGCCCGUCCCACUUCUGC -23
Get sequence
|
| Star sequence | Pab-Mir-1914_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- AGGAGGGGUCCCGCACUGGGAG -58
Get sequence
|
