MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-1914

Family name MIR-1914 (all species)
Seed CCUGUGC
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-1914 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054700.2: 68408966-68409023 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAUGAGACCUAUCAGCACGUGUGAGCCCGCCCUGUGCCCGUCCCACUUCUGCUGCUGCUUAGCUCAGGAGGGGUCCCGCACUGGGAGGGGCCCUCACACCCUACCCCCCCUAGCUUU
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Structure
        10        20          30         40        50         
GUAUGAGACCUAUCAGCAC      --    G-|  U    CCGU   A      CUGCUG 
                   GUGUGA  GCCC  CCC GUGC    CCC CUUCUG      \
                   CACACU  CGGG  GGG CACG    GGG GAGGAC      C
UUUCGAUCCCCCCCAUCC-      CC    GA^  U    CCCU   -      UCGAUU 
      110        100        90        80         70        60
Deep sequencing
CommentAlthough absent in M. mulatta this locus is present in other old world monkeys.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-1914_5p (predicted)

mirBase accessionNone
Sequence
0- CCCUGUGCCCGUCCCACUUCUGC -23
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Star sequence

Pab-Mir-1914_3p* (predicted)

mirBase accessionNone
Sequence
36- AGGAGGGGUCCCGCACUGGGAG -58
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