| MirGeneDB ID | Pab-Mir-3146 |
|---|
| Family name |
MIR-3146 (all species) |
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| Seed |
AUGCUAG |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-3146
Mml-Mir-3146
|
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054685.2: 65454766-65454828 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAGCGAUGCACAUUUUCUUUGCUAAGUCCCUUCUUUCUAUCCUAGUAUAACUUGAAGAAUUCAAAUAGUCAUGCUAGGAUAGAAAGAAUGGGACUCGGCCAGGGAAGAAGAGUUGAUUUACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACAGCGAUGCACAUUUU-- U UA -| A UUGAAGA
CUU GC AGUCCC UUCUUUCUAUCCUAGUAU AC A
GGA CG UCAGGG AAGAAAGAUAGGAUCGUA UG U
UCAUUUAGUUGAGAAGAAG C GC U^ C AUAAACU
120 110 100 90 80 70 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-3146_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CUUCUUUCUAUCCUAGUAUAAC -22
Get sequence
|
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| Mature sequence |
Pab-Mir-3146_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
40- CAUGCUAGGAUAGAAAGAAUGGG -63
Get sequence
|
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