MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-3174

Family name MIR-3174 (all species)
Seed AGUGAGU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-3174  Mml-Mir-3174 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054695.2: 93090431-93090500 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCCAUGGACCAGCAUCAGCGUUACCUGGUAGUGAGUUAGAGAUGCAGAGCCCUGGGCUCCUCAGCAAACCUACUGGAUCUGCAUUUUAAUUCACAUGCAUGGUAAUGUCUGUAAAGCACUGAUGGACU
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Structure
        10         20        30         40        50        60     
GGUCCAUGGACCAGCAUCA-        UG   -|      A          G  CUGGGCUCCUC 
                    GCGUUACC  GUA GUGAGUU GAGAUGCAGA CC           \
                    UGUAAUGG  CGU CACUUAA UUUUACGUCU GG           A
UCAGGUAGUCACGAAAUGUC        UA   A^      -          A  UCAUCCAAACG 
.       120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-3174_5p

mirBase accessionNone
Sequence
0- UAGUGAGUUAGAGAUGCAGAGCC -23
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Star sequence

Pab-Mir-3174_3p* (predicted)

mirBase accessionNone
Sequence
48- AUCUGCAUUUUAAUUCACAUGC -70
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