MirGeneDB ID | Pab-Mir-3174 |
Family name |
MIR-3174 (all species) |
Seed |
AGUGAGU |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Hsa-Mir-3174
Mml-Mir-3174
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Catarrhini
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 93090431-93090500 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGUCCAUGGACCAGCAUCAGCGUUACCUGGUAGUGAGUUAGAGAUGCAGAGCCCUGGGCUCCUCAGCAAACCUACUGGAUCUGCAUUUUAAUUCACAUGCAUGGUAAUGUCUGUAAAGCACUGAUGGACU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GGUCCAUGGACCAGCAUCA- UG -| A G CUGGGCUCCUC
GCGUUACC GUA GUGAGUU GAGAUGCAGA CC \
UGUAAUGG CGU CACUUAA UUUUACGUCU GG A
UCAGGUAGUCACGAAAUGUC UA A^ - A UCAUCCAAACG
. 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Pab-Mir-3174_5p |
mirBase accession | None |
Sequence |
0- UAGUGAGUUAGAGAUGCAGAGCC -23
Get sequence
|
Star sequence |
Pab-Mir-3174_3p* (predicted) |
mirBase accession | None |
Sequence |
48- AUCUGCAUUUUAAUUCACAUGC -70
Get sequence
|