| MirGeneDB ID | Pab-Mir-3909 |
|---|---|
| Family name | MIR-3909 (all species) |
| Seed | GUCCUCU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-3909 Mml-Mir-3909 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068844.1: 41873531-41873592 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGUUUGCUGUUGCGCCGUCAUUCCUCUGGGGAGCAGGCCCCGGGGGACAGGGAAAAGCACACAAGGAACUUGUCCUCUAGGGCCUGCAGUCUCACGGGAGAGUAACAUGCACCUGGACCGCCGet precursor sequence |
| Structure | 10 20 30 40 50 GGUUUGCUGUUGCGCCGUC CU - --| CG GAAAAGCA AUUC CUG GGGA GCAGGCCC GGGGACAGG \ UGAG GGC CUCU CGUCCGGG CUCCUGUUC C CCGCCAGGUCCACGUACAA AG A GA^ AU AAGGAACA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-3909_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GAGCAGGCCCCGGGGGACAGG -21
Get sequence
|
| Mature sequence | Pab-Mir-3909_3p (predicted) |
| mirBase accession | None |
| Sequence |
40- UGUCCUCUAGGGCCUGCAGUCU -62
Get sequence
|
