| MirGeneDB ID | Pab-Mir-4524 |
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| Family name |
MIR-4524 (all species) |
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| Seed |
GAGACAG |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Hsa-Mir-4524
Mml-Mir-4524
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| Node of Origin (locus) |
Catarrhini
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| Node of Origin (family) |
Catarrhini
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054698.2: 84448478-84448533 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAGUGAUUACCCUUCCUCUUUGGAAGGAUAGCAGCAUGGGCCUGUCUCACUGCAGAAUUAUUUUGAGACAGGCUCAUGCUGCUAUCCUUCCAAAGAACACAUCCACCCAGCUACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAAGUGAUUACCCUUCC--| CUGCAG
UCUUUGGAAGGAUAGCAGCAUGGGCCUGUCUCA A
AGAAACCUUCCUAUCGUCGUACUCGGACAGAGU A
UCAUCGACCCACCUACACA^ UUUAUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Pab-Mir-4524_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AGCAGCAUGGGCCUGUCUCACU -22
Get sequence
|
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| Mature sequence |
Pab-Mir-4524_3p |
| mirBase accession | None |
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| Sequence |
34- UGAGACAGGCUCAUGCUGCUAU -56
Get sequence
|
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