MirGeneDB ID | Pab-Mir-4661 |
Family name |
MIR-4661 (all species) |
Seed |
ACUAGCU |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Hsa-Mir-4661
Mml-Mir-4661
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Catarrhini
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054686.2: 107090557-107090615 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CACGUCACCUGAUGUCAGGUAUUUACUCUGAACUAGCUUUGUGGAUCCUGAUAGACAGCCUGAUAGACAGGAUCCACAGAGCUAGUCCAGAGUAAAAGACCUAAGUCAGCUGUGGUUGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CACGUCACCUGAUGUCA- A-| A AUAGACAG
GGU UUUACUCUG ACUAGCUUUGUGGAUCCUG \
CCA AAAUGAGAC UGAUCGAGACACCUAGGAC C
UGUUGGUGUCGACUGAAU GA^ C AGAUAGUC
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Pab-Mir-4661_5p (predicted) |
mirBase accession | None |
Sequence |
0- AACUAGCUUUGUGGAUCCUGAU -22
Get sequence
|
Star sequence |
Pab-Mir-4661_3p* (predicted) |
mirBase accession | None |
Sequence |
37- CAGGAUCCACAGAGCUAGUCCA -59
Get sequence
|