MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-4661

Family name MIR-4661 (all species)
Seed ACUAGCU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-4661  Mml-Mir-4661 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054686.2: 107090557-107090615 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACGUCACCUGAUGUCAGGUAUUUACUCUGAACUAGCUUUGUGGAUCCUGAUAGACAGCCUGAUAGACAGGAUCCACAGAGCUAGUCCAGAGUAAAAGACCUAAGUCAGCUGUGGUUGU
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Structure
        10         20         30        40        50         
CACGUCACCUGAUGUCA-   A-|        A                   AUAGACAG 
                  GGU  UUUACUCUG ACUAGCUUUGUGGAUCCUG        \
                  CCA  AAAUGAGAC UGAUCGAGACACCUAGGAC        C
UGUUGGUGUCGACUGAAU   GA^        C                   AGAUAGUC 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-4661_5p (predicted)

mirBase accessionNone
Sequence
0- AACUAGCUUUGUGGAUCCUGAU -22
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Star sequence

Pab-Mir-4661_3p* (predicted)

mirBase accessionNone
Sequence
37- CAGGAUCCACAGAGCUAGUCCA -59
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