| MirGeneDB ID | Pab-Mir-4661 |
|---|---|
| Family name | MIR-4661 (all species) |
| Seed | ACUAGCU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-4661 Mml-Mir-4661 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054686.2: 107090557-107090615 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CACGUCACCUGAUGUCAGGUAUUUACUCUGAACUAGCUUUGUGGAUCCUGAUAGACAGCCUGAUAGACAGGAUCCACAGAGCUAGUCCAGAGUAAAAGACCUAAGUCAGCUGUGGUUGUGet precursor sequence |
| Structure | 10 20 30 40 50 CACGUCACCUGAUGUCA- A-| A AUAGACAG GGU UUUACUCUG ACUAGCUUUGUGGAUCCUG \ CCA AAAUGAGAC UGAUCGAGACACCUAGGAC C UGUUGGUGUCGACUGAAU GA^ C AGAUAGUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-4661_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AACUAGCUUUGUGGAUCCUGAU -22
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|
| Star sequence | Pab-Mir-4661_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- CAGGAUCCACAGAGCUAGUCCA -59
Get sequence
|
