| MirGeneDB ID | Pab-Mir-4662 |
|---|
| Family name |
MIR-4662 (all species) |
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| Seed |
UAGCCAA |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-4662
Mml-Mir-4662
|
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054686.2: 141143409-141143462 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAAAAAGCCAUUGUGUACCACAGUGUCUAUUUAGCCAAUUGUCCAUCUUAUUCUGAAUGCCUAAAGAUAGACAAUUGGCUAAAUAGAAAUUGUGGUACAUCCAUACAAUGGAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAAAAGCCAUUGUGUA--| G C AUUCUG
CCACAGU UCUAUUUAGCCAAUUGUC AUCUU A
GGUGUUA AGAUAAAUCGGUUAACAG UAGAA A
UAAGGUAACAUACCUACAU^ A A AUCCGU
110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-4662_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGCCAAUUGUCCAUCUUAUU -22
Get sequence
|
|---|
| Star sequence |
Pab-Mir-4662_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
32- AAAGAUAGACAAUUGGCUAAAU -54
Get sequence
|
|---|
