| MirGeneDB ID | Pab-Mir-4664 |
|---|
| Family name |
MIR-4664 (all species) |
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| Seed |
GGGGUGC |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-4664
|
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| Node of Origin (locus) |
Hominidae
|
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| Node of Origin (family) |
Hominidae
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054686.2: 160236739-160236794 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUCGUAGGGUGCACUGACCCCGUUGGGGGCUGGGGUGCCCACUCCGCAAGUUAUCACUGAGCGACUUCCGGUCUGUGAGCCCCGUCCCCCGCACCCCACCUUUCCGCCGCCUAGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCGUAGGGUGCACUGACCCC---| U U GCC CU C AUCA
GU GGGGGC GGGGU CA CCG AAGUU C
CG CCCCUG CCCCG GU GGC UUCAG U
GAGAUCCGCCGCCUUUCCACCCCA^ C - AGU CU C CGAG
110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-4664_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGGGGUGCCCACUCCGCAAGUU -22
Get sequence
|
|---|
| Star sequence |
Pab-Mir-4664_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
34- CUUCCGGUCUGUGAGCCCCGUC -56
Get sequence
|
|---|
