MirGeneDB ID | Pab-Mir-4731 |
Family name |
MIR-4731 (all species) |
Seed |
GUUGGGG |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
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Paralogues |
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Orthologues |
Hsa-Mir-4731
|
Node of Origin (locus) |
Hominidae
|
Node of Origin (family) |
Hominidae
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054698.2: 15254079-15254132 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCCUUCUGACUGUGGUCAGGUCCCUGCCAGUGUUGGGGACCACAUGUGUGUGCAGUCAUCCACACACAUGUGGCCCCCAACACUGGCAGGGACCCGGAGUCAUCUGGACCAUCC
Get precursor sequence
|
Structure | 10 20 30 40 50
GCCUUCUGACUGUGGUCA--| A CAG
GGUCCCUGCCAGUGUUGGGG CCACAUGUGUGUG U
CCAGGGACGGUCACAACCCC GGUGUACACACAC C
CCUACCAGGUCUACUGAGGC^ C CUA
110 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Pab-Mir-4731_5p |
mirBase accession | None |
Sequence |
0- UGUUGGGGACCACAUGUGUGUG -22
Get sequence
|
Co-mature sequence |
Pab-Mir-4731_3p (predicted) |
mirBase accession | None |
Sequence |
32- CACACAUGUGGCCCCCAACACU -54
Get sequence
|