MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-4731

Family name MIR-4731 (all species)
Seed GUUGGGG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-4731 
Node of Origin (locus) Hominidae
Node of Origin (family) Hominidae
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054698.2: 15254079-15254132 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUUCUGACUGUGGUCAGGUCCCUGCCAGUGUUGGGGACCACAUGUGUGUGCAGUCAUCCACACACAUGUGGCCCCCAACACUGGCAGGGACCCGGAGUCAUCUGGACCAUCC
Get precursor sequence
Structure
        10          20        30        40        50      
GCCUUCUGACUGUGGUCA--|                   A             CAG 
                    GGUCCCUGCCAGUGUUGGGG CCACAUGUGUGUG   U
                    CCAGGGACGGUCACAACCCC GGUGUACACACAC   C
CCUACCAGGUCUACUGAGGC^                   C             CUA 
  110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-4731_5p

mirBase accessionNone
Sequence
0- UGUUGGGGACCACAUGUGUGUG -22
Get sequence
Co-mature sequence

Pab-Mir-4731_3p (predicted)

mirBase accessionNone
Sequence
32- CACACAUGUGGCCCCCAACACU -54
Get sequence