| MirGeneDB ID | Pab-Mir-4798 |
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| Family name |
MIR-4798 (all species) |
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| Seed |
UCGGUAU |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-4798
Mml-Mir-4798
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 5568931-5568989 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUAAAUUUGCAUAAUAAUAAAGUACAACUUCGGUAUACUUUGUGAAUUGGCUUUUACAAAAGACCAAAACAUGAAGUAUACUGAAGUCUUACUUUAUUACAACUAAAAAUGGUUUGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAAUAAAUUUGCAUAAU--| CA UG AA CUUUUA
AAUAAAGUA ACUUCGGUAUACUU UG UUGG \
UUAUUUCAU UGAAGUCAUAUGAA AC AACC C
UGUUUGGUAAAAAUCAACA^ UC GU AA AGAAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-4798_5p |
| mirBase accession | None |
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| Sequence |
0- UUCGGUAUACUUUGUGAAUUGG -22
Get sequence
|
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| Co-mature sequence |
Pab-Mir-4798_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AAAACAUGAAGUAUACUGAAGU -59
Get sequence
|
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