| MirGeneDB ID | Pab-Mir-5581 |
|---|---|
| Family name | MIR-5581 (all species) |
| Seed | CCUUCCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-5581 Mml-Mir-5581 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 196033957-196034015 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUCUAGAGUAAGGAGUUUUGCUGGCCUCAAGCCUUCCAGGAGAAAUGGAGACCCUAUACAUACCUGUUUCCAUGCCUCCUAGAAGUUCCGAAGCCAGGGUAAGAUUCCUUGUUCUAGAAGet precursor sequence |
| Structure | 10 20 30 40 50 UUCUAGAGUAAGGAGUUUUG--| C AAGC C AA CCUAUA CUGGC UC CUUC AGGAG AUGGAGAC \ GACCG AG GAAG UCCUC UACCUUUG C AAGAUCUUGUUCCUUAGAAUGG^ A CCUU A CG UCCAUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-5581_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- GCCUUCCAGGAGAAAUGGAGAC -22
Get sequence
|
| Co-mature sequence | Pab-Mir-5581_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UUCCAUGCCUCCUAGAAGUUCC -59
Get sequence
|
