| MirGeneDB ID | Pab-Mir-624 |
|---|---|
| Family name | MIR-624 (all species) |
| Seed | AGUACCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-624 Mml-Mir-624 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 34644118-34644175 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUUUGACCAAUAUAUAAUGCUGUUUCGAGGUAGUACCAGUACCUUGUGUUCAGUGGAACCAAGGUAAACACAAGGUAUUGGUAUUACCUUGAGAUAGCAUUACACCUAAGUGGUUUCAGet precursor sequence |
| Structure | 10 20 30 40 50 UUUUGACCAAUAUAUAA--| CAGUGGA UGCUGUUUCGAGGUAGUACCAGUACCUUGUGUU A ACGAUAGAGUUCCAUUAUGGUUAUGGAACACAA C ACUUUGGUGAAUCCACAUU^ AUGGAAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UGUG in loop |
| Mature sequence | Pab-Mir-624_5p |
| mirBase accession | None |
| Sequence |
0- UAGUACCAGUACCUUGUGUUCA -22
Get sequence
|
| Star sequence | Pab-Mir-624_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- AACACAAGGUAUUGGUAUUACC -58
Get sequence
|
