| MirGeneDB ID | Pab-Mir-7854 |
|---|---|
| Family name | MIR-7854 (all species) |
| Seed | GAGGUGG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-7854 |
| Node of Origin (locus) | Hominidae |
| Node of Origin (family) | Hominidae |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054697.2: 80948505-80948565 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAGGAGGCAGUGAACCUCUCCUGCCCCUUCCUUCCAUCUUCAUCACCUUGAGCAUCUUCUGGGCAGCUGAGGUGGCCGCAGAUGGGAAGGAAGGGCCCAGAGAUGAGGAUUUUCUUCUCUCGet precursor sequence |
| Structure | 10 20 30 40 50 CAGGAGGCAGUGAACCUC - C- - UCA-| G CAUCUU UC CUG CCCUUCCUU CCAUCU UCACCUU AG C AG GAC GGGAAGGAA GGUAGA GGUGGAG UC U CUCUCUUCUUUUAGGAGU A CC G CGCC^ - GACGGG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Pab-Mir-7854_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CUUCCAUCUUCAUCACCUUGAG -22
Get sequence
|
| Mature sequence | Pab-Mir-7854_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UGAGGUGGCCGCAGAUGGGAAGGA -61
Get sequence
|
