MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-934

Family name MIR-934 (all species)
Seed GUCUACU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-934  Mml-Mir-934 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054702.2: 142645210-142645266 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGAGAAUGAACUUGAGAAAUAAGCCUUCUGUCUACUACUGGAGACACUGGUAGUAUAAAACCCAGAGUCUCCAGUAAUGGACGGGAGCCUUAUUUCUAUCACUCAGUGUUUUCAU
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Structure
        10          20        30        40        50        
CCUGAGAAUGAACUUGA--|       C          C          A    UAGUA 
                   GAAAUAAG CUUCUGUCUA UACUGGAGAC CUGG     \
                   CUUUAUUC GAGGGCAGGU AUGACCUCUG GACC     U
UACUUUUGUGACUCACUAU^       C          A          A    CAAAA 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-934_5p (predicted)

mirBase accessionNone
Sequence
0- UGUCUACUACUGGAGACACUGG -22
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Star sequence

Pab-Mir-934_3p* (predicted)

mirBase accessionNone
Sequence
35- AGAGUCUCCAGUAAUGGACGGG -57
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