| MirGeneDB ID | Pbv-Mir-9650 |
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| Family name |
MIR-9650 (all species) |
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| Seed |
CAGUGCA |
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| Species |
Burmese python (Python bivittatus) |
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| MiRBase ID |
pbv-mir-9650
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
P. bivittatus
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| Node of Origin (family) |
P. bivittatus
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Genome context
(GCA_000186305.2_Python_molurus_bivittatus) |
KE960999.1: 18251-18307 [-]
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Precursor
(pre-Mir +30nt flank) |
UGAAAUCGACAAAUCAAUUCAUGUAUAUUCACAGUGCAUCAUGGGAUAUGUAGUUGCUAAAAAUACAUUUCCUUUCAUGUGCUGUGUGUAUGCCUGAGCAGUUAUCUGAAAUAACAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGAAAUCGACAAAUCAA--| U U UG CAU U GUUGC
UUCA GUAUAU CACAG CAU GGGA AUGUA \
GAGU CGUAUG GUGUC GUA UCCU UACAU U
AACAAUAAAGUCUAUUGAC^ C U GU CUU U AAAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Drosha cut +1 on both arms. |
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Pbv-Mir-9650_5p |
| mirBase accession | MIMAT0039096 |
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| Sequence |
0- ACAGUGCAUCAUGGGAUAUGUA -22
Get sequence
|
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| Co-mature sequence |
Pbv-Mir-9650_3p |
| mirBase accession | MIMAT0039097 |
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| Sequence |
35- CAUUUCCUUUCAUGUGCUGUGU -57
Get sequence
|
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