| MirGeneDB ID | Ple-Novel-3 |
|---|---|
| Family name | PLE-NOVEL-3 (all species) |
| Seed | CACCGGU |
| Species | Thorny-headed worm 2 (Pomphorhynchus laevis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | P. laevis |
| Node of Origin (family) | P. laevis |
| Genome context (GCA_012934845.2_ASM1293484v2_PLE_genomic) |
WNNJ02001397.1: 5929-5983 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | AGACUAAUAUUUCUAAUAUUUCUAAUUACGAAUCGAAAUGUACUGAGUCAUAUAGUUAGUAUUAUCACCGGUAUAUUACGAUUCGCUGUUAGAAAUACUAACCUAUACAUUUUACGet precursor sequence |
| Structure | 10 20 30 40 50 AGACUAAUAUUUCUAAU--| UA A A C UAGU AUUUCUAAU CGAAUCG AAUGUACUG GU AUA U UAAAGAUUG GCUUAGC UUAUAUGGC CA UAU A CAUUUUACAUAUCCAAUCA^ UC A - C UAUG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Ple-Novel-3_5p* |
| mirBase accession | None |
| Sequence |
0- AAUCGAAAUGUACUGAGUCAUA -22
Get sequence
|
| Mature sequence | Ple-Novel-3_3p |
| mirBase accession | None |
| Sequence |
34- UCACCGGUAUAUUACGAUUCG -55
Get sequence
|
