MirGeneDB 2.1

MirGeneDB ID

Rno-Mir-3075

Family name MIR-3075 (all species)
Seed GUCUGGG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-3075
Paralogues
Orthologues Mmu-Mir-3075 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(rn6)
chr16: 1822830-1822890 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGACCUGCUAUUUACUCUGCGGUUUGUACUGUCUGGGAGCAGCCAAGGACAAGUUACCUCUUGUCUUCUGUCCUUGGCCUUCCUAGGUGUCCAAGCUCACGCAGGCUGGGAGCCAGAGCA
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Structure
        10        20           30        40        50        60 
CAGACCUGCUAUUUACUCU   ---|    U  UGU       CA          AGUUACCU 
                   GCG   GUUUG AC   CUGGGAG  GCCAAGGACA        \
                   CGC   CGAAC UG   GAUCCUU  CGGUUCCUGU        C
ACGAGACCGAGGGUCGGA-   ACU^    C  UG-       C-          CUUCUGUU 
 .       110        100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Mature sequence

Rno-Mir-3075_5p

mirBase accessionMIMAT0025057
Sequence
0- UGUCUGGGAGCAGCCAAGGACAA -23
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Proposed targets TargetScanVert: rno-miR-3075
miRDB: MIMAT0025057
Star sequence

Rno-Mir-3075_3p*

mirBase accessionNone
Sequence
40- GUCCUUGGCCUUCCUAGGUGU -61
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