MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-6324

Family name MIR-6324 (all species)
Seed GCUCUGC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-6324
Paralogues
Orthologues
Node of Origin (locus) R. norvegicus
Node of Origin (family) R. norvegicus
Genome context
(rn6)		 chr11: 36383558-36383621 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGGAAUCACCAGAUAGCUGGGGUCAAGGUGCUCUGCUGACUGCCUAUGGGCUGUGGGAUCCAACUGAGUCAGUAGGCCAGACAGCAAGCACCUUUAUCCCUUGAGCAAUUUCACUGACCCUG
Get precursor sequence
Structure
        10        20          30        40         50        60 
GGUGGAAUCACCAGAUAGCU--|    C        C     A   -     G    GUGGGA 
                      GGGGU AAGGUGCU UGCUG CUG CCUAU GGCU      U
                      CCCUA UUCCACGA ACGAC GAC GGAUG CUGA      C
GUCCCAGUCACUUUAACGAGUU^    U        -     A   C     A    GUCAAC 
  120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-6324_5p
mirBase accessionNone
Sequence 
0- UGCUCUGCUGACUGCCUAUGGGCU -24
Get sequence
Star sequence

Rno-Mir-6324_3p*
mirBase accessionMIMAT0025063
Sequence 
40- UCAGUAGGCCAGACAGCAAGCACC -64
Get sequence
Proposed targets TargetScanVert: rno-miR-6324
miRDB: MIMAT0025063