| MirGeneDB ID | Sha-Mir-12476 |
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| Family name |
MIR-12476 (all species) |
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| Seed |
UAUGCUU |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Neu-Mir-12476
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| Node of Origin (locus) |
Australidelphia
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| Node of Origin (family) |
Australidelphia
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Genome context
(DEVIL_add) |
GL850377.1: 18230-18287 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAGUUCUUUAUUGGUCUGUUGGUCUCACCAUCCGGAAGUCCAAAAUGCAUGAUUUCUGCGUCGAAAUUAUGCUUUGGAAUUCCGUUACAAGCUGAUUUUUAGGUUAACGUUUUCUGUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAGUUCUUUAUUGGUCU-----| UG CUCACCAUC G AU UUUCUG
GU GU CGGAA UCCAAA GCAUGA C
UA CG GCCUU AGGUUU CGUAUU G
GUGUCUUUUGCAAUUGGAUUUU^ GU AACAUU--- A -- AAAGCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Mir-12476_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- UCCGGAAGUCCAAAAUGCAUGA -22
Get sequence
|
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| Mature sequence |
Sha-Mir-12476_3p |
| mirBase accession | None |
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| Sequence |
36- UUAUGCUUUGGAAUUCCGUUAC -58
Get sequence
|
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