| MirGeneDB ID | Sha-Mir-7383-P4b |
|---|
| Family name |
MIR-7383 (all species) |
|---|
| Seed |
AAGGUAC |
|---|
| Species |
Tasmanian devil (Sarcophilus harrisii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Sha-Mir-7383-P4a
Sha-Mir-7383-P4c
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
S. harrisii
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(DEVIL_add) |
GL868515.1: 2332-2390 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCAUCUCACCUGAUCAUGAUUGGUGUAUUCCAAGGUACCUGAGGUCCUCUUAUUUUAUUUUGGCUGUAAGAGGCUCCAGCUCCCUUUGUCUACCCCAGUAUAAAACUCCAGCAUCACUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAUCUCACCUGAUCAUG--| U UUCC UAC AG U UUUAU
AUUGG GUA AAGG CUG G CCUCUUAU U
UGACC CAU UUCC GAC C GGAGAAUG U
AUCACUACGACCUCAAAAUA^ C CUGU CUC CU - UCGGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Sha-Mir-7383-P4b_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CAAGGUACCUGAGGUCCUCUUAU -23
Get sequence
|
|---|
| Co-mature sequence |
Sha-Mir-7383-P4b_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AAGAGGCUCCAGCUCCCUUUGU -59
Get sequence
|
|---|
