MirGeneDB 3.0

MirGeneDB ID

Sne-Novel-11

Family name SNE-NOVEL-11 (all species)
Seed AGUCUGC
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) S. nebaliae
Node of Origin (family) S. nebaliae
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)
k141_3391: 171847-171932 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUUUUCUGAUUAUUUUUGGUAAACUAUCUACUUUGUGUUUUAAAGACUGGAUUGUUAAAUAUAUAAGAAUUUGUUAAUUCGAAUUGAAUUCUAGUCUGCAACGCACAAAGUGGUUAGUUCCAAUAAAGCGUCGAACGAUAAUAU
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Structure
        10            20        30        40        50        60        70  
AAGUUUUCUGAUUAUUU----|   UA     U           U  AA        UUGUUAAAUAUAUAAGAA 
                     UUGG  AACUA CUACUUUGUGU UU  AGACUGGA                  U
                     AACC  UUGAU GGUGAAACACG AA  UCUGAUCU                  U
UAUAAUAGCAAGCUGCGAAAU^   --     U           C  CG        UAAGUUAAGCUUAAUUGU 
    140       130         120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Po
Star sequence

Sne-Novel-11_5p*

mirBase accessionNone
Sequence
0- UACUUUGUGUUUUAAAGACUGGA -23
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Mature sequence

Sne-Novel-11_3p

mirBase accessionNone
Sequence
63- UAGUCUGCAACGCACAAAGUGGU -86
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