MirGeneDB 3.0

MirGeneDB ID

Sne-Novel-3

Family name SNE-NOVEL-3 (all species)
Seed UGUAUCA
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) S. nebaliae
Node of Origin (family) S. nebaliae
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)
k141_1823: 16095-16213 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUAUGAUUAUAAAAAUAUCUUGUUGACAUUAUGUAUCAGUAGCACAGGCGUUAUCUAUAACCCAGUGUAAGGGGAUUAUUACACAAUACCUAAUACCUAAUAUCCUCUUACAAUGCGUUAUAGAUAACGCCUGUGCGAUUGAUACAUAUUUUCAUAAUAAUAUGAACGAAAUGUCAAUU
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Structure
        10        20          30        40        50        60        70        80         
CUAUGAUUAUAAAAAUAUCUUGU--|  CAU           A          UAUCUAUAACCCAGUGUAAGGGGAUUAUUACACAAUA 
                         UGA   UAUGUAUCAGU GCACAGGCGU                                     \
                         ACU   AUACAUAGUUA CGUGUCCGCA                                     C
UUAACUGUAAAGCAAGUAUAAUAAU^  UUU           G          AUAGAUAUUGCGUAACAUUCUCCUAUAAUCCAUAAUC 
       170       160       150       140       130       120       110       100        90
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Po
Mature sequence

Sne-Novel-3_5p

mirBase accessionNone
Sequence
0- AUGUAUCAGUAGCACAGGCGU -21
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Star sequence

Sne-Novel-3_3p*

mirBase accessionNone
Sequence
98- GCCUGUGCGAUUGAUACAUAU -119
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