MirGeneDB 3.0

MirGeneDB ID

Sne-Novel-7

Family name SNE-NOVEL-7 (all species)
Seed ACAUGUA
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) S. nebaliae
Node of Origin (family) S. nebaliae
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)
k141_4594: 80636-80728 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUUCUCCGAAAAACAUAGUCAAAUGUGUCGUUCAAUCUCGGUUCAUGUUAUCUUGCCGAAACGAAACUUUCGUCGUCAUCGACAAUUGAUAUACAAUGAUACAUGUACGUGAUUGGACGAUGAAUUCGACUAUCUAUCAUCAUCUCAAUAA
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Structure
        10          20        30        40        50        60        70       
AUCUUCUCCGAAAAACA--|    A   G            U  GUU     U   UUGCCGAAACGAAACUUUCGUC 
                   UAGUC AAU UGUCGUUCAAUC CG   CAUGU AUC                      \
                   AUCAG UUA GUAGCAGGUUAG GC   GUACA UAG                      G
AAUAACUCUACUACUAUCU^    C   A            U  AU-     -   UAACAUAUAGUUAACAGCUACU 
 150       140       130       120       110         100        90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Po
Star sequence

Sne-Novel-7_5p*

mirBase accessionNone
Sequence
0- CGUUCAAUCUCGGUUCAUGUUAUC -24
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Mature sequence

Sne-Novel-7_3p

mirBase accessionNone
Sequence
71- UACAUGUACGUGAUUGGACGAU -93
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