| MirGeneDB ID | Sro-Novel-1 |
|---|---|
| Family name | SRO-NOVEL-1 (all species) |
| Seed | GUGACCG |
| Species | Roscoff worm (Symsagittifera roscoffensis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | S. roscoffensis |
| Node of Origin (family) | S. roscoffensis |
| Genome context (GCA_025153585.1_SymRos_1_5_genomic) |
JANVAR010001102.1: 64632-64698 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUUUGACUGUUGAACCCGAUCUUUUCACUUUGUGACCGUAAGUAGAAUCUUGAGAAUUUCCAGUUGAACAAACUCAAGAUAUACAUUCGGUCACCACUCGAAAGGUUCACGAAAAAAAAGUCAGGAAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AUUUGACUGUUGAACCC--| U ACUUU UAA GA GAAUUUCCA GA CUUUUC GUGACCG GUA AUCUUGA G CU GGAAAG CACUGGC CAU UAGAACU U AAGGACUGAAAAAAAAGCA^ U CUCAC UUA A- CAAACAAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Sro-Novel-1_5p |
| mirBase accession | None |
| Sequence |
0- UGUGACCGUAAGUAGAAUCUUGA -23
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|
| Star sequence | Sro-Novel-1_3p* |
| mirBase accession | None |
| Sequence |
45- AAGAUAUACAUUCGGUCACCAC -67
Get sequence
|
