| MirGeneDB ID | Sto-Novel-2 |
|---|
| Family name |
STO-NOVEL-2 (all species) |
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| Seed |
ACAGAGA |
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| Species |
Cloudy Catshark (Scyliorhinus torazame) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
S. torazame
|
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| Node of Origin (family) |
S. torazame
|
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Genome context
(GCA_003427355_STO_add) |
BFAA01001833.1: 124860-124919 [-]
|
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Precursor
(pre-Mir +30nt flank) |
UAAAUCACUGAACUGCAGUCCAGGGCAAGCUACAGAGAGGACAUCUGAAACAGUUUUCCAUACCUCUGUUCACAGAUGACUUCCUGAAGCAAAGUUAAACUCUACAAACCGAGUGGAGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAAAUCACUGAACUGCAGUCCAGGGCAA--| A A A A- GUUUUC
GCU CAG GAGG CAUCUG AACA C
CGA GUC CUUC GUAGAC UUGU A
AAGAGGUGAGCCAAACAUCUCAAAUUGAAA^ A - A AC CUCCAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Sto-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UACAGAGAGGACAUCUGAAACA -22
Get sequence
|
|---|
| Star sequence |
Sto-Novel-2_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- UUCACAGAUGACUUCCUGAAGC -60
Get sequence
|
|---|
