MirGeneDB 2.1

MirGeneDB ID

Tgu-Mir-1781

Family name MIR-1781 (all species)
Seed UUUAAAU
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-1781
Paralogues
Orthologues Cli-Mir-1781  Gga-Mir-1781 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(TaeGut1_add)
14: 3993241-3993300 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAAAAGAUGUGAGACAAGGAGCUUGUUGAGCAGCUGAGUGAUUUAAAAGCAAUCAAAUUCUUACAGCUUUAAAUCAUGCAGCUGUUGAACAAGUUCUUUCUUCAUUUGUCCCGAGUCC
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Structure
        10          20        30        40        50          
UGGAAAAGAUGUGAGAC--|           G        A          A  AAUCAAA 
                   AAGGAGCUUGUU AGCAGCUG GUGAUUUAAA GC       \
                   UUUCUUGAACAA UUGUCGAC UACUAAAUUU CG       U
CCUGAGCCCUGUUUACUUC^           G        G          -  ACAUUCU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-1781_5p* (predicted)

mirBase accessionNone
Sequence
0- AGCAGCUGAGUGAUUUAAAAGC -22
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Mature sequence

Tgu-Mir-1781_3p

mirBase accessionMIMAT0025406
Sequence
38- CUUUAAAUCAUGCAGCUGUUGA -60
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