MirGeneDB ID | Tgu-Mir-2984 |
Family name |
MIR-2984 (all species) |
Seed |
GCCUGCU |
Species |
Zebra finch (Taeniopygia guttata) |
MiRBase ID |
tgu-mir-2984
|
Paralogues |
|
Orthologues |
Cli-Mir-2984
Gga-Mir-2984
|
Node of Origin (locus) |
Neognathae
|
Node of Origin (family) |
Neognathae
|
Genome context (TaeGut1_add) |
1: 75112556-75112622 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GACUCCCACAAUGAAAUGCUUCACCUGCGGAGCCUGCUGAGAGUGAAAUUGAUAAAGGACAGCACCAGCCCAGGCAAUUUCACUCACAGCGGGCACUUGCAGGUGAAGCACUACCAUAAAAUGGAGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GACUCCCACAAUGAAAU- -| A A AUAAAGGACAG
GCUUCACCUGC GG GCCUGCUG GAGUGAAAUUG \
CGAAGUGGACG UC CGGGCGAC CUCACUUUAAC C
CGAGGUAAAAUACCAUCA U^ A A GGACCCGACCA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Tgu-Mir-2984_5p |
mirBase accession | MIMAT0014494 |
Sequence |
0- AGCCUGCUGAGAGUGAAAUUGA -22
Get sequence
|
Star sequence |
Tgu-Mir-2984_3p* |
mirBase accession | MIMAT0026970 |
Sequence |
45- AAUUUCACUCACAGCGGGCACU -67
Get sequence
|