| MirGeneDB ID | Xbo-Novel-1 |
|---|---|
| Family name | XBO-NOVEL-1 (all species) |
| Seed | GAUGACA |
| Species | Xenoturbella (Xenoturbella bocki) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. bocki |
| Node of Origin (family) | X. bocki |
| Genome context (genome.xe) |
scaffold537: 80030-80088 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AACGUGAGAAUAAGAGGACCAUGCCUGAUUCUUUGCCUCAUUUGUCAUGUCAUUCUCCUAAAGGUAAUGAUGACAAGUGAGACAAUGGACCUUGUAUGGCUAUAAACAACGCUAGCAGCGet precursor sequence |
| Structure | 10 20 30 40 50 AACGUGAGAAUAAGAGGA--| CUGA U C UG CUCCU CCAUGC UUC UUG CUCAUUUGUCA UCAUU \ GGUAUG AGG AAC GAGUGAACAGU AGUAA A CGACGAUCGCAACAAAUAUC^ UUCC U A -- UGGAA 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Xbo-Novel-1_5p* |
| mirBase accession | None |
| Sequence |
0- CUUUGCCUCAUUUGUCAUGUCAUU -24
Get sequence
|
| Mature sequence | Xbo-Novel-1_3p |
| mirBase accession | None |
| Sequence |
37- UGAUGACAAGUGAGACAAUGGA -59
Get sequence
|
