| MirGeneDB ID | Xbo-Novel-2 |
|---|---|
| Family name | XBO-NOVEL-2 (all species) |
| Seed | GCCGUCU |
| Species | Xenoturbella (Xenoturbella bocki) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. bocki |
| Node of Origin (family) | X. bocki |
| Genome context (genome.xe) |
scaffold2339: 30693-30755 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUGAAACAAGAGUUGUGACUGUCCCCAGUUGCCGUCUACUUUACUCCUCGCGUGGAUAUUCUAAGCUCACACGAGAGUUAAGCGACGUCGACUGGAGAUGGUUGAUAUCGUCGUUGUCGUCCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UCUGAAACAAGAGUUGU--| C C UA U C C UGGAUAUU GACUGUC CCAGUUG CGUC CUU ACUC UCG G \ UUGGUAG GGUCAGC GCAG GAA UGAG AGC C C CCUGCUGUUGCUGCUAUAG^ A U C- U - A ACUCGAAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Xbo-Novel-2_5p |
| mirBase accession | None |
| Sequence |
0- UGCCGUCUACUUUACUCCUCGCG -23
Get sequence
|
| Star sequence | Xbo-Novel-2_3p* |
| mirBase accession | None |
| Sequence |
42- CGAGAGUUAAGCGACGUCGAC -63
Get sequence
|
