MirGeneDB ID | Xla-Mir-383-P1 |
Family name |
MIR-383 (all species) |
Seed |
GAUCAGA |
Species |
African clawed frog (Xenopus laevis) |
MiRBase ID |
|
Paralogues |
Xla-Mir-383-P2
|
Orthologues |
Mun-Mir-383
Spt-Mir-383
|
Node of Origin (locus) |
X. laevis
|
Node of Origin (family) |
Tetrapoda
|
Genome context (GCF_001663975.1_XLA_v2) |
NC_030724.1: 34120806-34120867 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUACAGGAAACCUCAGUCACUUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUUAGUAGAUAGAAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUUGCCUUUUGCUCCAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAUACAGGAAACCUCAGU- C-| A AA A UUUAGUAG
CACUUGCUC UC GAUCAG GGUG UUGUGGCU \
GUGAACGAG AG CUGGUC UCAC GACACCGA A
AACCUCGUUUUCCGUUCAU AA^ A CG - CGAAAGAU
120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Xla-Mir-383-P1_5p |
mirBase accession | None |
Sequence |
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
|
Star sequence |
Xla-Mir-383-P1_3p* (predicted) |
mirBase accession | None |
Sequence |
41- CCACAGCACUGCCUGGUCAGA -62
Get sequence
|