| MirGeneDB ID | Xla-Novel-1 |
|---|---|
| Family name | XLA-NOVEL-1 (all species) |
| Seed | CUUUUGU |
| Species | African clawed frog (Xenopus laevis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. laevis |
| Node of Origin (family) | X. laevis |
| Genome context (GCF_001663975.1_XLA_v2) |
NC_030740.1: 80641622-80641683 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUUUAUAAUGUGUCAAAAGCCUAGACAUGCUCUUUUGUCAGCUUUUGGAUUCAAAAUGGUUGCAUUGCUGAGCCAAUAGCAAACAAGGGAGCAUGUAUAUGUAGCAAUCUCCUGCGAUGGUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 UUUUAUAAUGUGUCAAAA--| C G CA U A AAAUGGU GC UA ACAUGCUCUUUUGU GCU UUGG UUCA \ UG AU UGUACGAGGGAACA CGA AACC GAGU U UUGGUAGCGUCCUCUAACGA^ U A AA U - CGUUACG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Xla-Novel-1_5p |
| mirBase accession | None |
| Sequence |
0- UCUUUUGUCAGCUUUUGGAUUCA -23
Get sequence
|
| Star sequence | Xla-Novel-1_3p* |
| mirBase accession | None |
| Sequence |
40- AGCCAAUAGCAAACAAGGGAGC -62
Get sequence
|
