| MirGeneDB ID | Xla-Novel-10 |
|---|---|
| Family name | XLA-NOVEL-10 (all species) |
| Seed | AAUUGAU |
| Species | African clawed frog (Xenopus laevis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. laevis |
| Node of Origin (family) | X. laevis |
| Genome context (GCF_001663975.1_XLA_v2) |
NC_030736.1: 45266004-45266062 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAAUCCAGGGAAUCCAGAGCAUUGAGCAGUAAAUUGAUUCUGUUGAACUCAAGAUUGACCCGUGUUGAGUUUAACUGUAUUGGUUUGGCUGCUCCAUGCUGUUAAACUAUAUUCCGCUCGet precursor sequence |
| Structure | 10 20 30 40 50 CAAUCCAGGGAAUCCAG-- U -| UG UCU AGAUUG AGCAU GAGCAG UAAAU AU GUUGAACUCA A UCGUA CUCGUC GUUUG UA CAAUUUGAGU C CUCGCCUUAUAUCAAAUUG C G^ GU UGU UGUGCC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Xla-Novel-10_5p |
| mirBase accession | None |
| Sequence |
0- AAAUUGAUUCUGUUGAACUCA -21
Get sequence
|
| Star sequence | Xla-Novel-10_3p* |
| mirBase accession | None |
| Sequence |
37- AGUUUAACUGUAUUGGUUUGGC -59
Get sequence
|
