| MirGeneDB ID | Xla-Novel-4 |
|---|---|
| Family name | XLA-NOVEL-4 (all species) |
| Seed | AACACAG |
| Species | African clawed frog (Xenopus laevis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. laevis |
| Node of Origin (family) | X. laevis |
| Genome context (GCF_001663975.1_XLA_v2) |
NC_030726.1: 17766247-17766306 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCUCUCUGCCUGUGUUGGCCUGUUUGCAGAAACACAGAAUGGGUAUGAGUGUGAAACUUCAUUUUCAUUGAUAUCUGCUCCGUGUGUCUGCAUGCAGACCAAUGCCAUGCCAGAGACACGet precursor sequence |
| Structure | 10 20 30 40 50 GGCUCUCUGCCUGUGUU--| C U A A AU G UGAAAC GG CUGU UGCAGA ACAC GA GGGUAU AGUG U CC GACG ACGUCU UGUG CU UCUAUA UUAC U CACAGAGACCGUACCGUAA^ A U G C CG G UUUUAC . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Mature sequence | Xla-Novel-4_5p |
| mirBase accession | None |
| Sequence |
0- AAACACAGAAUGGGUAUGAGUG -22
Get sequence
|
| Star sequence | Xla-Novel-4_3p* |
| mirBase accession | None |
| Sequence |
38- UUGAUAUCUGCUCCGUGUGUCU -60
Get sequence
|
