| MirGeneDB ID | Xla-Novel-6 |
|---|---|
| Family name | XLA-NOVEL-6 (all species) |
| Seed | UCAGCUC |
| Species | African clawed frog (Xenopus laevis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. laevis |
| Node of Origin (family) | X. laevis |
| Genome context (GCF_001663975.1_XLA_v2) |
NC_030728.1: 132156645-132156701 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUUUGUUCUGGGACCUCUUGGAGUGAAACUGGGUGAGUUUAAGAGUUGUAGAUAUUUUGGAUGUUUCAGCUCUUUAACUUUCCAGGUUCUUCCCAAGCCAUUACCCCGGUUUAUACGet precursor sequence |
| Structure | 10 20 30 40 50 UCUUUGUUCUGGGACCU--| AGU A U U U UAUUU CUUGG GAA CUGGG GAGUU AAGAGUUG AGA \ GAACC CUU GACCU UUCAA UUCUCGAC UUU U CAUAUUUGGCCCCAUUACC^ CUU G - U - GUAGG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Xla-Novel-6_5p* |
| mirBase accession | None |
| Sequence |
0- UGGGUGAGUUUAAGAGUUGUAGA -23
Get sequence
|
| Mature sequence | Xla-Novel-6_3p |
| mirBase accession | None |
| Sequence |
35- UUCAGCUCUUUAACUUUCCAGG -57
Get sequence
|
