MirGeneDB ID | Xla-Novel-7 |
---|---|
Family name | XLA-NOVEL-7 (all species) |
Seed | CUGACCC |
Species | African clawed frog (Xenopus laevis) |
MiRBase ID | |
Paralogues | |
Orthologues | |
Node of Origin (locus) | X. laevis |
Node of Origin (family) | X. laevis |
Genome context (GCF_001663975.1_XLA_v2) |
NC_030734.1: 106285682-106285754 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | UAAAUUAUGUUGUAAUAUUUCUGACCCUGCUGGGGCAAUUGUGAGUCAGAUGAUUAUCAUUGUAAAAUGGUUAAUGCUGUCUCUGACCCGCAAUGGCACCAGUAGGGUCAGAGGAAUUGCAAGCGUUGCCUAUGet precursor sequence |
Structure | 10 20 30 40 50 60 UAAAUUAUGUUGUAAUA--| G A A U AUUAUCAUUGUAA UUUCUGACCCUGCUGG GC AUUGUG GUCAGA G A GGAGACUGGGAUGACC CG UAACGC CAGUCU C A UAUCCGUUGCGAACGUUAA^ A G C - UGUCGUAAUUGGU 130 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Xla-Novel-7_5p* |
mirBase accession | None |
Sequence |
0- UGGGGCAAUUGUGAGUCAGAUG -22
Get sequence
|
Mature sequence | Xla-Novel-7_3p |
mirBase accession | None |
Sequence |
51- UCUGACCCGCAAUGGCACCAGU -73
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