| MirGeneDB ID | Xla-Novel-8 |
|---|---|
| Family name | XLA-NOVEL-8 (all species) |
| Seed | GAACACA |
| Species | African clawed frog (Xenopus laevis) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | X. laevis |
| Node of Origin (family) | X. laevis |
| Genome context (GCF_001663975.1_XLA_v2) |
NC_030735.1: 119656848-119656905 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGCAGGGAGAAAUGCUGGAUGUUACUGGGCAGAACACACUGCAGACUCAUAGUUUCAUUCAGCUCCAUGGUCUGUAUUGUGUCUCAGCCUGUAAAUCUAAGUCUGAUGUGUCAGGAAAGet precursor sequence |
| Structure | 10 20 30 40 50 AGCAGGGAGAAAUGCUG----| G U A - C U AGUUUCA GAU UUAC GGGC GA ACACA UGCAGAC CAU U CUA AAUG UCCG CU UGUGU AUGUCUG GUA U AAAGGACUGUGUAGUCUGAAU^ - - A C U - CCUCGAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Xla-Novel-8_5p |
| mirBase accession | None |
| Sequence |
0- AGAACACACUGCAGACUCAUAG -22
Get sequence
|
| Star sequence | Xla-Novel-8_3p* |
| mirBase accession | None |
| Sequence |
36- AUGGUCUGUAUUGUGUCUCAGC -58
Get sequence
|
