MirGeneDB 3.0

9 Alligator mississippiensis microRNA genes of family MIR-199 (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Ami-Mir-199-P1-v1 ami-mir-199-2 MIR-199 CAGUAGU MIMAT0038216 MIMAT0038217 NW_017709598.1 581638 581698 - Gnathostomata Vertebrata No 1
Ami-Mir-199-P1-v2 ami-mir-199-2 MIR-199 ACAGUAG MIMAT0038216 MIMAT0038217 NW_017709598.1 581638 581698 - Gnathostomata Vertebrata No 1
Ami-Mir-199-P1-v3 ami-mir-199-2 MIR-199 AGUAGUC MIMAT0038216 MIMAT0038217 NW_017709598.1 581638 581698 - Gnathostomata Vertebrata No 1
Ami-Mir-199-P2-v1 ami-mir-199-3 MIR-199 CAGUAGU MIMAT0038216 MIMAT0038217 NW_017713629.1 13712829 13712889 + Gnathostomata Vertebrata No 1
Ami-Mir-199-P2-v2 ami-mir-199-3 MIR-199 ACAGUAG MIMAT0038216 MIMAT0038217 NW_017713629.1 13712829 13712889 + Gnathostomata Vertebrata No 1
Ami-Mir-199-P2-v3 ami-mir-199-3 MIR-199 AGUAGUC MIMAT0038216 MIMAT0038217 NW_017713629.1 13712829 13712889 + Gnathostomata Vertebrata No 1
Ami-Mir-199-P3-v1 ami-mir-199-1 MIR-199 CAGUAGU MIMAT0038216 MIMAT0038217 NW_017709389.1 179937 179999 - Gnathostomata Vertebrata No 1
Ami-Mir-199-P3-v2 ami-mir-199-1 MIR-199 ACAGUAG MIMAT0038216 MIMAT0038217 NW_017709389.1 179937 179999 - Gnathostomata Vertebrata No 1
Ami-Mir-199-P3-v3 ami-mir-199-1 MIR-199 AGUAGUC MIMAT0038216 MIMAT0038217 NW_017709389.1 179937 179999 - Gnathostomata Vertebrata No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix