MirGeneDB 2.1

4 Alligator mississippiensis microRNA genes with seed GGAAUGU (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Ami-Mir-1-P1 ami-mir-1a-2 MIR-1 GGAAUGU MIMAT0038020 MIMAT0038019 NW_017707644.1 130805 130865 - Gnathostomata Bilateria No 1
Ami-Mir-1-P2 ami-mir-206 MIR-1 GGAAUGU MIMAT0038231 MIMAT0038232 NW_017710918.1 2014199 2014258 + Gnathostomata Bilateria No
Ami-Mir-1-P3 ami-mir-1a-1 MIR-1 GGAAUGU MIMAT0038018 MIMAT0038019 NW_017708899.1 1710026 1710086 - Gnathostomata Bilateria No
Ami-Mir-1-P4 ami-mir-1b MIR-1 GGAAUGU MIMAT0038021 MIMAT0038022 NW_017707671.1 2164097 2164159 - Gnathostomata Bilateria No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix