MirGeneDB 3.0

3 Cavia porcellus microRNA genes with seed AGUAGUC (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Cpo-Mir-199-P1-v3 cpo-mir-199-2 MIR-199 AGUAGUC MIMAT0047086 MIMAT0047087 scaffold_12 11462616 11462676 + Gnathostomata Vertebrata No 1
Cpo-Mir-199-P2-v3 cpo-mir-199-3 MIR-199 AGUAGUC MIMAT0047088 MIMAT0047087 scaffold_27 3923324 3923384 + Gnathostomata Vertebrata No
Cpo-Mir-199-P3-v3 cpo-mir-199-1 MIR-199 AGUAGUC MIMAT0047086 MIMAT0047087 scaffold_226 180917 180979 - Gnathostomata Vertebrata No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix