MirGeneDB 3.0

12 Cavia porcellus microRNA genes with seed GAGGUAG (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Cpo-Let-7-P1b cpo-let-7e LET-7 GAGGUAG MIMAT0046826 MIMAT0046827 scaffold_70 6340207 6340273 - Gnathostomata Bilateria No
Cpo-Let-7-P1c cpo-let-7c LET-7 GAGGUAG MIMAT0046822 MIMAT0046823 scaffold_34 6524372 6524438 - Gnathostomata Bilateria No 1
Cpo-Let-7-P1d cpo-let-7a-2 LET-7 GAGGUAG MIMAT0046817 MIMAT0046819 scaffold_19 26138016 26138082 + Gnathostomata Bilateria No 1
Cpo-Let-7-P2a1 cpo-let-7a-1 LET-7 GAGGUAG MIMAT0046817 MIMAT0046818 scaffold_42 101718 101789 + Gnathostomata Bilateria Yes
Cpo-Let-7-P2a2 cpo-let-7a-3 LET-7 GAGGUAG MIMAT0046817 MIMAT0046818 scaffold_160 1994495 1994562 - Gnathostomata Bilateria Yes
Cpo-Let-7-P2a3 cpo-let-7f-2 LET-7 GAGGUAG MIMAT0046828 MIMAT0046830 scaffold_139 1794194 1794264 + Gnathostomata Bilateria Yes 1
Cpo-Let-7-P2b1 cpo-let-7f-1 LET-7 GAGGUAG MIMAT0046828 MIMAT0046829 scaffold_42 102061 102137 + Gnathostomata Bilateria Yes 1 1
Cpo-Let-7-P2b2 cpo-let-7b LET-7 GAGGUAG MIMAT0046820 MIMAT0046821 scaffold_160 1994146 1994220 - Gnathostomata Bilateria Yes 1
Cpo-Let-7-P2b3 cpo-mir-98 LET-7 GAGGUAG MIMAT0046939 MIMAT0046940 scaffold_139 1795150 1795228 + Gnathostomata Bilateria Yes 1
Cpo-Let-7-P2c1 cpo-let-7d LET-7 GAGGUAG MIMAT0046824 MIMAT0046825 scaffold_42 104190 104264 + Gnathostomata Bilateria Yes 1
Cpo-Let-7-P2c2 cpo-let-7i LET-7 GAGGUAG MIMAT0046833 MIMAT0046834 scaffold_9 35660321 35660397 - Gnathostomata Bilateria Yes 1
Cpo-Let-7-P2c3 cpo-let-7g LET-7 GAGGUAG MIMAT0046831 MIMAT0046832 scaffold_8 27229788 27229865 - Gnathostomata Bilateria Yes 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix