MirGeneDB ID | Aae-Mir-11895-P1 |
Family name |
MIR-11895 (all species) |
Seed |
GCAGGAG |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-11895-1
|
Paralogues |
Aae-Mir-11895-P2
|
Orthologues |
|
Node of Origin (locus) |
A. aegypti
|
Node of Origin (family) |
A. aegypti
|
Genome context (Aaeg_L3) |
supercont1.216: 1788479-1788538 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCAGUGUUUUCCAACUCGGCCUGCAGAUAAGCAGGAGUGAAUGCAUGAGUUUGGCAUUUGAAACUAAUUCAUGCAUUCACUUCUGCUGAUCUUCUGUGCGGAUGAUCUUCAGUUCAUUU
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCAGUGUUUUCCAACU- G CU UA---| UGGCAU
C GC GCAGA AGCAGGAGUGAAUGCAUGAGUU U
G CG UGUCU UCGUCUUCACUUACGUACUUAA U
UUUACUUGACUUCUAGUA G -- UCUAG^ UCAAAG
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Aae-Mir-11895-P1_5p |
mirBase accession | None |
Sequence |
0- AGCAGGAGUGAAUGCAUGAGUU -22
Get sequence
|
Star sequence |
Aae-Mir-11895-P1_3p* |
mirBase accession | MIMAT0045992 |
Sequence |
38- UUCAUGCAUUCACUUCUGCUGA -60
Get sequence
|