MirGeneDB 3.0
119 Aedes aegypti microRNA genes
Sort by genome coordinates Motifs Tissue expression
-   +
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ge Ge So So To To To
Aae-Bantam aae-bantam BANTAM GAGAUCA MIMAT0014218 MIMAT0014219 supercont1.49 1579554 1579618 - Protostomia Protostomia No 1
Aae-Iab-4-P1 aae-mir-iab-4-1 IAB-4 CGUAUAC MIMAT0014278 MIMAT0016977 supercont1.708 50265 50321 + A. aegypti Arthropoda Unknown 1 1
Aae-Iab-4-P1-as None IAB-4 UACGUAU None None supercont1.708 50262 50321 - A. aegypti Arthropoda Unknown 1 1
Aae-Iab-4-P2 aae-mir-iab-4-2 IAB-4 CGUAUAC MIMAT0014278 MIMAT0016977 supercont1.423 763491 763547 - A. aegypti Arthropoda Unknown 1 1
Aae-Iab-4-P2-as None IAB-4 UACGUAU None None supercont1.423 763491 763550 + A. aegypti Arthropoda Unknown 1 1
Aae-Let-7 aae-let-7 LET-7 GAGGUAG MIMAT0014299 None supercont1.43 1156331 1156393 + Bilateria Bilateria No 1 1 1
Aae-Mir-1 aae-mir-1 MIR-1 GGAAUGU None MIMAT0014244 supercont1.812 291334 291394 + Bilateria Bilateria No 1
Aae-Mir-2-P1-v1 aae-mir-2c MIR-2 AUCACAG None MIMAT0014308 supercont1.268 889091 889155 - Arthropoda Protostomia No
Aae-Mir-2-P1-v2 aae-mir-2c MIR-2 CACAGCC None MIMAT0014308 supercont1.268 889091 889155 - Arthropoda Protostomia No
Aae-Mir-2-P2b aae-mir-13 MIR-2 AUCACAG MIMAT0014255 MIMAT0014256 supercont1.268 888744 888807 - Neoptera Protostomia No
Aae-Mir-2-P3 aae-mir-2a MIR-2 AUCACAG MIMAT0014225 MIMAT0014226 supercont1.268 888595 888663 - Arthropoda Protostomia No 1 1
Aae-Mir-2-P4-v1 aae-mir-2b MIR-2 AUCACAG None MIMAT0014306 supercont1.268 887257 887317 - Arthropoda Protostomia No
Aae-Mir-2-P4-v2 aae-mir-2b MIR-2 CACAGCC None MIMAT0014306 supercont1.268 887257 887317 - Arthropoda Protostomia No
Aae-Mir-2-P5a aae-mir-2944b MIR-2 AAGGAAC MIMAT0014304 MIMAT0015373 supercont1.602 93656 93722 + Culicidae Protostomia No
Aae-Mir-2-P5b aae-mir-2944b MIR-2 AAGGAAC MIMAT0014304 MIMAT0015373 supercont1.150 907506 907572 + Culicidae Protostomia No
Aae-Mir-2-P7 aae-mir-11 MIR-2 AUCACAG MIMAT0014241 MIMAT0014242 supercont1.744 322020 322083 + Neoptera Protostomia No 1
Aae-Mir-2-P8 aae-mir-308 MIR-2 GCGGUAU MIMAT0014260 MIMAT0014261 supercont1.107 508980 509042 + Aparaglossata Protostomia No
Aae-Mir-3-o1a aae-mir-309a-1 MIR-3 CACUGGG None MIMAT0014272 supercont1.602 94041 94109 + A. aegypti Pancrustacea No 1
Aae-Mir-3-o1b aae-mir-309a-2 MIR-3 CACUGGG None MIMAT0014272 supercont1.150 907891 907959 + A. aegypti Pancrustacea No 1
Aae-Mir-3-o2 aae-mir-309b MIR-3 CACUGGG MIMAT0014319 MIMAT0014320 supercont1.464 825634 825696 + Culicidae Pancrustacea Unknown 1
Aae-Mir-7 aae-mir-7 MIR-7 GGAAGAC MIMAT0014290 None supercont1.1359 46041 46102 + Bilateria Bilateria No 1
Aae-Mir-8 aae-mir-8 MIR-8 AAUACUG MIMAT0014214 MIMAT0014215 supercont1.411 876052 876113 + Bilateria Nephrozoa Yes 1
Aae-Mir-9-P10a aae-mir-9a-2 MIR-9 CUUUGGU MIMAT0014323 None supercont1.517 574919 574980 + A. aegypti Bilateria No 1 1
Aae-Mir-9-P10b aae-mir-9a-1 MIR-9 CUUUGGU MIMAT0014323 None supercont1.517 555117 555178 + A. aegypti Bilateria No 1 1
Aae-Mir-9-P11 aae-mir-9c MIR-9 CUUUGGU MIMAT0014212 MIMAT0014213 supercont1.785 186231 186302 + Neoptera Bilateria No 1
Aae-Mir-9-P12-v1 aae-mir-79 MIR-9 AAAGCUA MIMAT0014294 MIMAT0014295 supercont1.785 213277 213338 + Neoptera Bilateria No
Aae-Mir-9-P12-v2 aae-mir-79 MIR-9 UAAAGCU MIMAT0014294 MIMAT0014295 supercont1.785 213278 213337 + Neoptera Bilateria No
Aae-Mir-9-P13 aae-mir-9b MIR-9 CUUUGGU MIMAT0014324 None supercont1.785 213584 213648 + Neoptera Bilateria No
Aae-Mir-10-P1-v1 aae-mir-10 MIR-10 CCCUGUA MIMAT0014277 None supercont1.440 813557 813619 + Bilateria Eumetazoa No
Aae-Mir-10-P1-v2 aae-mir-10 MIR-10 ACCCUGU MIMAT0014277 None supercont1.440 813556 813620 + Bilateria Eumetazoa No 1
Aae-Mir-10-P2 aae-mir-100 MIR-10 ACCCGUA MIMAT0014291 None supercont1.43 1142184 1142245 + Bilateria Eumetazoa No
Aae-Mir-10-P3 aae-mir-125 MIR-10 CCCUGAG MIMAT0014258 None supercont1.43 1156615 1156673 + Bilateria Eumetazoa No
Aae-Mir-10-P4 aae-mir-993 MIR-10 ACCCUGU MIMAT0014266 None supercont1.1056 256798 256871 + Protostomia Eumetazoa No
Aae-Mir-12 aae-mir-12 MIR-12 GAGUAUU MIMAT0014253 MIMAT0014254 supercont1.68 2720399 2720490 - Protostomia Protostomia No 1
Aae-Mir-14 aae-mir-14 MIR-14 CAGUCUU None MIMAT0014240 supercont1.249 1089019 1089083 - Neoptera Neoptera No 1
Aae-Mir-22-P2 aae-mir-980 MIR-22 AGCUGCC MIMAT0014235 MIMAT0014236 supercont1.23 1043029 1043091 + Bilateria Bilateria No
Aae-Mir-29-P1 aae-mir-285 MIR-29 AGCACCA None MIMAT0014273 supercont1.23 3339153 3339214 - Bilateria Bilateria No
Aae-Mir-29-P2h aae-mir-998 MIR-29 AGCACCA None MIMAT0014227 supercont1.744 322296 322358 + Neoptera Bilateria Yes
Aae-Mir-31 aae-mir-31 MIR-31 GGCAAGA MIMAT0014276 None supercont1.636 483222 483279 - Bilateria Bilateria No 1 1
Aae-Mir-33 aae-mir-33 MIR-33 AAUACUU MIMAT0014287 None supercont1.487 351656 351721 + Bilateria Bilateria Yes
Aae-Mir-34 aae-mir-34 MIR-34 GGCAGUG MIMAT0014245 MIMAT0014246 supercont1.265 509536 509636 + Bilateria Bilateria No 1
Aae-Mir-67-v1 aae-mir-307 MIR-67 CACAACC None MIMAT0014296 supercont1.16 1859430 1859488 - Protostomia Protostomia No
Aae-Mir-67-v2 aae-mir-307 MIR-67 ACAACCU None MIMAT0014296 supercont1.16 1859430 1859488 - Protostomia Protostomia No
Aae-Mir-71 aae-mir-71 MIR-71 GAAAGAC MIMAT0014220 MIMAT0014221 supercont1.268 889383 889449 - Bilateria Nephrozoa No
Aae-Mir-76 aae-mir-981 MIR-76 UCGUUGU None MIMAT0014267 supercont1.127 638380 638443 - Bilateria Nephrozoa No 1
Aae-Mir-87-P2 aae-mir-87 MIR-87 UGAGCAA None MIMAT0014252 supercont1.360 1010798 1010867 + Protostomia Protostomia No 1 1
Aae-Mir-92-P3 aae-mir-92a MIR-92 AUUGCAC MIMAT0015369 MIMAT0014228 supercont1.116 1267213 1267274 + Pancrustacea Bilateria No 1 1
Aae-Mir-92-P4 aae-mir-92b MIR-92 AUUGCAC MIMAT0014321 MIMAT0014322 supercont1.116 1319161 1319222 + Pancrustacea Bilateria No 1
Aae-Mir-96-P2 aae-mir-263b MIR-96 UUGGCAC MIMAT0014309 MIMAT0014310 supercont1.28 2323846 2323911 + Bilateria Bilateria No 1
Aae-Mir-96-P3 aae-mir-263a MIR-96 AUGGCAC MIMAT0014289 MIMAT0015372 supercont1.981 164960 165021 - Bilateria Bilateria No 1
Aae-Mir-124 aae-mir-124 MIR-124 AAGGCAC None MIMAT0014282 supercont1.6 1664621 1664680 - Bilateria Bilateria No 1
Aae-Mir-133 aae-mir-133 MIR-133 UGGUCCC None MIMAT0014275 supercont1.778 350306 350389 - Bilateria Bilateria No 1
Aae-Mir-137-P11 aae-mir-137-1 MIR-137 AUUGCUU None MIMAT0014274 supercont1.1191 97805 97865 + A. aegypti Bilateria No 1
Aae-Mir-137-P12 aae-mir-137-2 MIR-137 AUUGCUU None MIMAT0014274 supercont1.137 260684 260744 - A. aegypti Bilateria No 1
Aae-Mir-184 aae-mir-184 MIR-184 GGACGGA None MIMAT0014207 supercont1.496 143378 143438 - Bilateria Nephrozoa No 1
Aae-Mir-190 aae-mir-190 MIR-190 GAUAUGU MIMAT0014243 None supercont1.195 82213 82277 - Bilateria Bilateria No 1
Aae-Mir-193-P1 aae-mir-193 MIR-193 ACUGGCC None MIMAT0014305 supercont1.519 717094 717160 + Bilateria Bilateria No
Aae-Mir-210-v1 aae-mir-210 MIR-210 UGUGCGU None MIMAT0014293 supercont1.512 515646 515703 - Bilateria Bilateria No 1
Aae-Mir-210-v2 aae-mir-210 MIR-210 UUGUGCG None MIMAT0014293 supercont1.512 515646 515703 - Bilateria Bilateria No 1
Aae-Mir-216-P1 aae-mir-283 MIR-216 AAUAUCA MIMAT0014279 None supercont1.68 2729347 2729416 - Bilateria Nephrozoa No
Aae-Mir-216-P2 aae-mir-1889 MIR-216 AAUCUCA MIMAT0014233 MIMAT0014234 supercont1.68 2720796 2720917 - Bilateria Nephrozoa No 1
Aae-Mir-219 aae-mir-219 MIR-219 GAUUGUC MIMAT0014307 None supercont1.368 610337 610404 + Bilateria Bilateria No 1
Aae-Mir-252-P2 aae-mir-252 MIR-252 UAAGUAC MIMAT0014216 MIMAT0014217 supercont1.56 1580027 1580081 - Bilateria Bilateria No 1
Aae-Mir-275 aae-mir-275 MIR-275 CAGGUAC MIMAT0014208 MIMAT0014209 supercont1.24 486551 486613 + Arthropoda Arthropoda No 1
Aae-Mir-276-P1 aae-mir-276-2 MIR-276 AGGAACU None MIMAT0014223 supercont1.5 2769509 2769572 - Diptera Arthropoda No 1
Aae-Mir-276-P2 aae-mir-276-1 MIR-276 AGGAACU MIMAT0014222 MIMAT0014223 supercont1.134 38986 39047 + Diptera Arthropoda No 1 1
Aae-Mir-277 aae-mir-277 MIR-277 AAAUGCA MIMAT0014210 MIMAT0014211 supercont1.265 508812 508882 + Protostomia Protostomia No 1
Aae-Mir-278 aae-mir-278 MIR-278 CGGUGGG MIMAT0014237 MIMAT0014238 supercont1.16 3596269 3596332 + Bilateria Bilateria No 1 1
Aae-Mir-279-P1a aae-mir-286a MIR-279 GACUAGA None MIMAT0014314 supercont1.464 825007 825079 + Culicidae Protostomia Unknown 1
Aae-Mir-279-P1b1 aae-mir-286b-1 MIR-279 GACUAGA None MIMAT0014313 None None None None A. aegypti Protostomia No
Aae-Mir-279-P1b2 aae-mir-286b-2 MIR-279 GACUAGA None MIMAT0014313 None None None None A. aegypti Protostomia No
Aae-Mir-279-P2 aae-mir-279 MIR-279 GACUAGA None MIMAT0014288 supercont1.437 572258 572322 - Pancrustacea Protostomia No 1
Aae-Mir-279-P3 aae-mir-996 MIR-279 GACUAGA None MIMAT0014251 supercont1.437 567506 567574 - Pancrustacea Protostomia No 1
Aae-Mir-279-P25 aae-mir-2945 MIR-279 GACUAGA MIMAT0014315 MIMAT0014316 supercont1.43 958696 958759 + Culicidae Protostomia No 1
Aae-Mir-281 aae-mir-281 MIR-281 AGAGAGC MIMAT0014231 MIMAT0014232 supercont1.957 134462 134520 + Bilateria Nephrozoa No 1
Aae-Mir-282-P1 aae-mir-282-1 MIR-282 AGCCUCU MIMAT0014311 MIMAT0014312 supercont1.369 992996 993069 + A. aegypti Pancrustacea Unknown 1
Aae-Mir-282-P2 aae-mir-282-2 MIR-282 AGCCUCU MIMAT0014311 MIMAT0014312 supercont1.377 313232 313305 - A. aegypti Pancrustacea Unknown 1
Aae-Mir-305 aae-mir-305 MIR-305 UUGUACU MIMAT0014249 MIMAT0014250 supercont1.24 495601 495661 + Cryptovermes Cryptovermes No
Aae-Mir-306 aae-mir-306 MIR-306 CAGGUAC MIMAT0014229 MIMAT0014230 supercont1.785 213078 213173 + Neoptera Neoptera No 1
Aae-Mir-315 aae-mir-315 MIR-315 UUUGAUU MIMAT0014262 MIMAT0015370 supercont1.612 104143 104206 + Bilateria Nephrozoa No 1 1
Aae-Mir-316 aae-mir-316 MIR-316 GUCUUUU MIMAT0014317 None supercont1.289 891286 891348 - Pancrustacea Pancrustacea No 1 1
Aae-Mir-317-P8 aae-mir-317-1 MIR-317 GAACACA None MIMAT0014224 supercont1.265 429465 429527 + A. aegypti Protostomia No 1
Aae-Mir-317-P9 aae-mir-317-2 MIR-317 GAACACA None MIMAT0014224 supercont1.153 2154713 2154775 - A. aegypti Protostomia No 1
Aae-Mir-375 aae-mir-375 MIR-375 UUGUUCG None MIMAT0014298 supercont1.309 1318752 1318834 - Bilateria Nephrozoa No 1
Aae-Mir-750 aae-mir-1174 MIR-750 CAGAUCU None MIMAT0014265 supercont1.125 1647834 1647944 + Protostomia Protostomia No 1
Aae-Mir-927-P1 aae-mir-927 MIR-927 UUAGAAU None MIMAT0014271 supercont1.26 2065419 2065482 + Neoptera Neoptera No 1 1 1
Aae-Mir-927-P2 aae-mir-10365 MIR-927 UUAGAAU MIMAT0045993 None supercont1.620 576227 576299 - Neoptera Neoptera No 1 1
Aae-Mir-929-P1 aae-mir-929-1 MIR-929 AAUUGAC MIMAT0015648 None supercont1.2867 3310 3368 + A. aegypti Neoptera No 1
Aae-Mir-929-P2 aae-mir-929-2 MIR-929 AAUUGAC MIMAT0015648 None supercont1.260 788409 788467 - A. aegypti Neoptera No 1
Aae-Mir-932 aae-mir-932 MIR-932 CAAUUCC MIMAT0014269 MIMAT0014270 supercont1.1064 154116 154175 - Neoptera Neoptera No 1 1
Aae-Mir-957 aae-mir-957 MIR-957 GAAACCG None MIMAT0014248 supercont1.7 464294 464360 + Diptera Diptera No
Aae-Mir-965 aae-mir-965 MIR-965 GGGGAAA None MIMAT0014268 supercont1.51 2008659 2008722 + Pancrustacea Pancrustacea No 1 1
Aae-Mir-970 aae-mir-970 MIR-970 CAUAAGA None MIMAT0014292 supercont1.229 1045835 1045895 + Aparaglossata Aparaglossata No 1
Aae-Mir-971 None MIR-971 UGGUGUU None None supercont1.141 748863 748925 + Neoptera Neoptera No
Aae-Mir-988 aae-mir-988 MIR-988 CCCUUGU MIMAT0014280 MIMAT0014281 supercont1.442 623057 623115 - Panorpida Panorpida No 1
Aae-Mir-989 aae-mir-989 MIR-989 GUGAUGU None MIMAT0014239 supercont1.115 804186 804251 - Endopterygota Endopterygota No 1
Aae-Mir-999 aae-mir-999 MIR-999 GUUAACU None MIMAT0014257 supercont1.100 2315106 2315166 + Diptera Diptera No 1
Aae-Mir-1000-P1 aae-mir-1000-1 MIR-1000 UAUUGUC MIMAT0014297 None supercont1.187 325478 325532 + A. aegypti Neoptera No
Aae-Mir-1000-P2 aae-mir-1000-2 MIR-1000 UAUUGUC MIMAT0014297 None supercont1.3798 190 244 - A. aegypti Neoptera No
Aae-Mir-1175 aae-mir-1175 MIR-1175 GAGAUUC MIMAT0014264 MIMAT0015371 supercont1.125 1648037 1648098 + Protostomia Protostomia No
Aae-Mir-1890 aae-mir-1890 MIR-1890 GAAAUCU None MIMAT0014247 supercont1.204 1733314 1733377 + Culicidae Culicidae No
Aae-Mir-1891-P1-v1 aae-mir-1891-1 MIR-1891 GAGGAGU MIMAT0014263 None supercont1.466 72802 72859 + A. aegypti Culicidae No 1
Aae-Mir-1891-P1-v2 aae-mir-1891-1 MIR-1891 UGAGGAG MIMAT0014263 None supercont1.466 72801 72860 + A. aegypti Culicidae No 1
Aae-Mir-1891-P2-v1 aae-mir-1891-2 MIR-1891 GAGGAGU MIMAT0014263 None supercont1.199 1109714 1109771 - A. aegypti Culicidae No 1
Aae-Mir-1891-P2-v2 aae-mir-1891-2 MIR-1891 UGAGGAG MIMAT0014263 None supercont1.199 1109713 1109772 - A. aegypti Culicidae No 1
Aae-Mir-2765 aae-mir-2765 MIR-2765 GGUAACU MIMAT0014285 None supercont1.1 5248310 5248367 + Neoptera Neoptera Unknown 1
Aae-Mir-2796 None MIR-2796 UAGGCCG None None supercont1.309 120075 120135 - Neoptera Neoptera No 1
Aae-Mir-2940-v1 aae-mir-2940 MIR-2940 GUCGACA MIMAT0014283 MIMAT0014284 supercont1.222 643960 644064 + Culicidae Culicidae No 1
Aae-Mir-2940-v2 aae-mir-2940 MIR-2940 UCGACAG MIMAT0014283 MIMAT0014284 supercont1.222 643960 644064 + Culicidae Culicidae No 1
Aae-Mir-2941-P1 aae-mir-2946 MIR-2941 AGUACGG None MIMAT0014325 supercont1.385 413577 413638 - A. aegypti A. aegypti No 1
Aae-Mir-2941-P2 aae-mir-2941-1 MIR-2941 AGUACGG None MIMAT0014286 supercont1.385 413146 413210 - A. aegypti A. aegypti No 1
Aae-Mir-11893-P1 aae-mir-11893-2 MIR-11893 UCCUGAC None MIMAT0045989 supercont1.154 394987 395045 + A. aegypti A. aegypti No
Aae-Mir-11893-P2 aae-mir-11893-1 MIR-11893 UCCUGAC None MIMAT0045989 supercont1.154 420378 420436 + A. aegypti A. aegypti No
Aae-Mir-11895-P1 aae-mir-11895-1 MIR-11895 GCAGGAG None MIMAT0045992 supercont1.216 1788479 1788538 + A. aegypti A. aegypti No 1
Aae-Mir-11895-P2 aae-mir-11895-2 MIR-11895 UCAUGCA None MIMAT0045992 supercont1.396 820001 820060 - A. aegypti A. aegypti No 1
Aae-Mir-11899-P1 aae-mir-11899-1 MIR-11899 AUGUAUG None MIMAT0045998 supercont1.548 126322 126384 + A. aegypti A. aegypti No 1
Aae-Mir-11899-P2 aae-mir-11899-2 MIR-11899 AUGUAUG None MIMAT0045998 supercont1.1446 67711 67773 - A. aegypti A. aegypti No 1
Aae-Mir-11900 aae-mir-11900 MIR-11900 UUUUUUU None MIMAT0045999 supercont1.245 1561006 1561085 - A. aegypti A. aegypti No 1
Aae-Mir-11911 aae-mir-11911 MIR-11911 GUUGAUC MIMAT0046010 None supercont1.89 2726022 2726075 + A. aegypti A. aegypti No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix