MirGeneDB 3.0

MirGeneDB ID

Aae-Mir-1890

Family name MIR-1890 (all species)
Seed GAAAUCU
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-1890
Paralogues
Orthologues Aga-Mir-1890 
Node of Origin (locus) Culicidae
Node of Origin (family) Culicidae
Genome context
(Aaeg_L3)
supercont1.204: 1733314-1733377 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGCAGUGAUCAAGGAUAUCGACAUACGGCUAGAGCUAAUUGGAGAGUUCUUGAAUAGUGUUGUGAACCUUCAUGAAAUCUUUGAUUAGGUCUGGUCGUGGUGGUUUAUCAACGCGUUGGAUUCU
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Structure
        10        20          30        40        50        60 
AGCAGUGAUCAAGGAUAUCGA-  -|         G     UG    G   U  AAUAGUGU 
                      CA UACGGCUAGA CUAAU  GAGA UUC UG        U
                      GU GUGCUGGUCU GAUUA  UUCU AAG AC        G
UCUUAGGUUGCGCAACUAUUUG  G^         G     GU    A   U  UUCCAAGU 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ge Ge So So To To To
Star sequence

Aae-Mir-1890_5p*

mirBase accessionNone
Sequence
0- AGAGCUAAUUGGAGAGUUCUUG -22
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Mature sequence

Aae-Mir-1890_3p

mirBase accessionMIMAT0014247
Sequence
42- UGAAAUCUUUGAUUAGGUCUGG -64
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